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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57864725_57865571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57864725 - 57865571

Intron Length:

847

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTGCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTAAATATACCT

Flanking Amino Acid:

GKNATEPTKKSEKQLECLLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

82.6

0.73

0.9

76.8

37.1

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

45.3

-0.2

67.66

42.6

Associated Gene:

Gene:

GNPTAB

Ensembl Gene ID:

ENSAPLG00000016228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018535

57860717 - 57896394

35678

ENSAPLT00000035536

57854173 - 57892194

38022

ENSAPLT00000016947

57849502 - 57896394

46893

ENSAPLT00000033453

57854173 - 57896394

42222

ENSAPLT00000029165

57854173 - 57895808

41636

ENSAPLT00000043829

57854173 - 57896394

42222

ENSAPLT00000018690

57863707 - 57896394

32688

ENSAPLT00000037752

57856495 - 57896394

39900