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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57866525_57866814_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57866525 - 57866814

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTACT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

CTTTTTTTACCC

Flanking Amino Acid:

SKQIVWRGYLTTDKEVPGLV

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

78.9

34.5

Major BPS

81.6

0.78

0.8

24.9

Major PPT

79.8

0.67

0.8

77.6

36.1

Minor 5ss

44.6

-0.6

2.5

57.8

40.7

Minor BPS

64.1

0.42

1.6

72.92

38.9

Associated Gene:

Gene:

GNPTAB

Ensembl Gene ID:

ENSAPLG00000016228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018690

57863707 - 57896394

32688

ENSAPLT00000035536

57854173 - 57892194

38022

ENSAPLT00000018535

57860717 - 57896394

35678

ENSAPLT00000033453

57854173 - 57896394

42222

ENSAPLT00000016947

57849502 - 57896394

46893

ENSAPLT00000029165

57854173 - 57895808

41636

ENSAPLT00000043829

57854173 - 57896394

42222

ENSAPLT00000023732

57854173 - 57896394

42222

ENSAPLT00000037752

57856495 - 57896394

39900