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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57885058_57886030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57885058 - 57886030

Intron Length:

973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GTGACCTTAATG

Flanking Amino Acid:

KKKYFQDLLDEEESLLKEMS

Intron Amino Acid Position:

876

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

83.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

77.9

0.63

0.8

77.2

31.5

Minor 5ss

37.3

-1.4

2.9

50.4

39.3

Minor BPS

67.6

0.42

1.4

64.99

42.9

Associated Gene:

Gene:

GNPTAB

Ensembl Gene ID:

ENSAPLG00000016228

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018690

57863707 - 57896394

32688

ENSAPLT00000035536

57854173 - 57892194

38022

ENSAPLT00000018535

57860717 - 57896394

35678

ENSAPLT00000033453

57854173 - 57896394

42222

ENSAPLT00000016947

57849502 - 57896394

46893

ENSAPLT00000029165

57854173 - 57895808

41636

ENSAPLT00000043829

57854173 - 57896394

42222

ENSAPLT00000023732

57854173 - 57896394

42222

ENSAPLT00000037752

57856495 - 57896394

39900