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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5788606_5790269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5788606 - 5790269

Intron Length:

1664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

ATGTGTTTAATG

Flanking Amino Acid:

TLFIFLVCCQIPLFGIMSSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

81.8

0.79

1.1

34.5

Major PPT

0.45

1.1

41.3

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

56.7

0.07

1.8

60.93

Associated Gene:

Gene:

SEC61A2

Ensembl Gene ID:

ENSAPLG00000005921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006192

5783106 - 5797927

14822