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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57899394_57900551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

57899394 - 57900551

Intron Length:

1158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TATGTTTCAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTTAT

U12 Branch Point Sequence:

TATGTTTCAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

26.6

Major BPS

64.7

0.37

1.2

55.4

41.7

Major PPT

70.7

0.47

0.9

66.9

Minor 5ss

-1.6

2.8

44.6

43.4

Minor BPS

53.2

0.1

1.6

63.78

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001551

57899366 - 57909674

10309