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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5790349_5792917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5790349 - 5792917

Intron Length:

2569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTAGTAGA

5'SS Class:

major

3'SS Sequence:

TCTTCCTGGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AGTAATATAATT

Flanking Amino Acid:

WMRVILASNRGTLMELGISP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

70.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

72.2

0.5

72.9

37.4

Minor 5ss

-2.2

2.4

27.1

35.9

Minor BPS

47.9

-0

1.8

66.14

38.1

Associated Gene:

Gene:

SEC61A2

Ensembl Gene ID:

ENSAPLG00000005921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006192

5783106 - 5797927

14822