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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57904215_57905244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57904215 - 57905244

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTGTTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTGTAATACTT

Flanking Amino Acid:

EHVWKTQQEQRQKLNHDFSQ

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

1.1

81.6

33.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

78.2

0.63

0.9

72.4

37.8

Minor 5ss

49.4

-0

2.9

73.9

42.6

Minor BPS

44.5

-0.3

2.1

69.16

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001551

57899366 - 57909674

10309