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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57920779_57921732_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57920779 - 57921732

Intron Length:

954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCTTA

5'SS Class:

weak_major

3'SS Sequence:

GGATCCTGCATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TGTCCTTGGATC

Flanking Amino Acid:

FDHGCDSISTAIRLGTNPDW

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.2

65.9

42.7

Major BPS

0.65

1.5

85.7

34.9

Major PPT

56.2

0.14

49.9

39.1

Minor 5ss

55.6

0.19

2.8

Minor BPS

0.11

1.4

64.55

34.9

Associated Gene:

Gene:

CHPT1

Ensembl Gene ID:

ENSAPLG00000001976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020627

57920660 - 57929939

9280