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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57920806_57921732_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

57920806 - 57921732

Intron Length:

927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCCTTA

5'SS Class:

weak_major

3'SS Sequence:

TTCTGCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

ATGTGACTAACA

Flanking Amino Acid:

FDHGCDSISTVFVVLGSCIA

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.2

65.9

42.7

Major BPS

84.8

0.86

85.7

34.9

Major PPT

86.7

0.83

0.7

84.4

30.6

Minor 5ss

55.6

0.19

2.8

Minor BPS

46.4

-0.2

2.3

63.83

42.1

Associated Gene:

Gene:

CHPT1

Ensembl Gene ID:

ENSAPLG00000001976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021309

57916319 - 57929939

13621

ENSAPLT00000002087

57916989 - 57930745

13757