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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57921881_57929696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57921881 - 57929696

Intron Length:

7816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGCCC

5'SS Class:

major

3'SS Sequence:

GAATCTCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

TGACCTTTCACA

Flanking Amino Acid:

VASCPSATEQAPFWAYILGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.3

41.7

Major BPS

77.7

0.69

30.2

Major PPT

74.5

0.55

0.9

70.2

40.8

Minor 5ss

36.5

-1.5

3.5

51.8

44.9

Minor BPS

56.2

0.19

1.8

66.5

39.6

Associated Gene:

Gene:

CHPT1

Ensembl Gene ID:

ENSAPLG00000001976

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021309

57916319 - 57929939

13621

ENSAPLT00000002087

57916989 - 57930745

13757