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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5793050_5793194_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5793050 - 5793194

Intron Length:

145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAG

Flanking Amino Acid:

DRALFNGAQKLFGMIITIGQ

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

31.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.4

0.68

0.8

73.3

37.1

Minor 5ss

32.3

-2

3.3

46.1

42.2

Minor BPS

72.6

0.57

1.4

75.95

35.7

Associated Gene:

Gene:

SEC61A2

Ensembl Gene ID:

ENSAPLG00000005921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006192

5783106 - 5797927

14822