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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5793305_5793912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5793305 - 5793912

Intron Length:

608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTAAT

5'SS Class:

major

3'SS Sequence:

TCTTTTCCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TTCTGCTCAGTT

Flanking Amino Acid:

AGICLLIIIQLFVAGLIVLL

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

80.8

32.8

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

84.9

0.79

0.7

80.2

25.3

Minor 5ss

39.8

-1.1

2.5

51.4

45.2

Minor BPS

48.2

-0

2.2

71.83

45.5

Associated Gene:

Gene:

SEC61A2

Ensembl Gene ID:

ENSAPLG00000005921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006192

5783106 - 5797927

14822