Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_57943957_57944770_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57943957 - 57944770

Intron Length:

814

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGCAA

5'SS Class:

major

3'SS Sequence:

GTTTCTACCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TTGTTTCTACCA

Flanking Amino Acid:

LNCSVRGNPKPKITWLKNKV

Intron Amino Acid Position:

1101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

59.3

41.3

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

76.1

0.59

0.9

69.8

35.3

Minor 5ss

28.3

-2.5

3.5

46.9

Minor BPS

49.6

-0

1.9

66.89

40.2

Associated Gene:

Gene:

MYBPC1

Ensembl Gene ID:

ENSAPLG00000007103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007443

57937476 - 58016222

78747

ENSAPLT00000040800

57937476 - 58016222

78747

ENSAPLT00000033973

57937476 - 58016222

78747

ENSAPLT00000031822

57937476 - 58016222

78747

ENSAPLT00000046080

57935062 - 58016222

81161

ENSAPLT00000031287

57937476 - 58016222

78747

ENSAPLT00000044144

57937476 - 58016222

78747