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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57950744_57951213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57950744 - 57951213

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

ATGTCAAAAATA

Flanking Amino Acid:

PQPILVKEVVEPPKIRLPRH

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

29.6

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

92.3

0.95

0.6

91.5

19.8

Minor 5ss

39.2

-1.2

51.6

45.1

Minor BPS

45.3

-0.3

2.1

59.82

40.2

Associated Gene:

Gene:

MYBPC1

Ensembl Gene ID:

ENSAPLG00000007103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031822

57937476 - 58016222

78747

ENSAPLT00000046080

57935062 - 58016222

81161

ENSAPLT00000031287

57937476 - 58016222

78747

ENSAPLT00000044144

57937476 - 58016222

78747

ENSAPLT00000007443

57937476 - 58016222

78747

ENSAPLT00000040800

57937476 - 58016222

78747

ENSAPLT00000033973

57937476 - 58016222

78747