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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5796405_5796626_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5796405 - 5796626

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

TCCCCTCTCACA

Flanking Amino Acid:

FLVNLLGQWADVSGGGPARS

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

77.1

0.61

0.7

71.2

26.8

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

45.7

-0.3

56.78

42.8

Associated Gene:

Gene:

SEC61A2

Ensembl Gene ID:

ENSAPLG00000005921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006192

5783106 - 5797927

14822