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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5796819_5796972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5796819 - 5796972

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTAGGTGTT

5'SS Class:

major

3'SS Sequence:

CATGTTTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

GGTTCATAAAAC

Flanking Amino Acid:

IEVSGSSAKDVAKQLKEQQM

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

76.2

39.9

Major BPS

0.4

1.1

66.5

36.3

Major PPT

74.9

0.56

0.9

69.2

36.6

Minor 5ss

38.6

-1.3

3.6

56.4

Minor BPS

48.8

-0.1

62.89

41.7

Associated Gene:

Gene:

SEC61A2

Ensembl Gene ID:

ENSAPLG00000005921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006192

5783106 - 5797927

14822