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Intron Name: Anas_platyrhynchos_platyrhynchos_1_57990432_57993248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57990432 - 57993248

Intron Length:

2817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCCTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAGAT

U12 Branch Point Sequence:

ACTTCCTACACA

Flanking Amino Acid:

TETENAPPPPEQKTPQEGGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

1.1

82.6

29.8

Major BPS

67.4

0.43

1.1

63.4

42.8

Major PPT

71.4

0.48

0.9

65.4

34.6

Minor 5ss

32.6

-2

3.1

41.2

45.2

Minor BPS

55.1

0.15

2.1

69.2

43.4

Associated Gene:

Gene:

MYBPC1

Ensembl Gene ID:

ENSAPLG00000007103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033973

57937476 - 58016222

78747

ENSAPLT00000031822

57937476 - 58016222

78747

ENSAPLT00000046080

57935062 - 58016222

81161

ENSAPLT00000031287

57937476 - 58016222

78747

ENSAPLT00000044144

57937476 - 58016222

78747

ENSAPLT00000007443

57937476 - 58016222

78747

ENSAPLT00000040800

57937476 - 58016222

78747