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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5802096_5802735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5802096 - 5802735

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTGTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TGCTTTTGAAAA

Flanking Amino Acid:

YKGEVVECTPALCLDPGLSN

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.65

0.9

72.9

37.4

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

52.4

0.07

1.5

61.64

38.4

Associated Gene:

Gene:

NUDT5

Ensembl Gene ID:

ENSAPLG00000005616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030638

5801482 - 5811701

10220

ENSAPLT00000027298

5800149 - 5809189

9041

ENSAPLT00000019545

5800149 - 5811701

11553

ENSAPLT00000005846

5800253 - 5809189

8937