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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5803470_5804141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5803470 - 5804141

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

TTGTGCTTATGT

Flanking Amino Acid:

AGRKKGVSADGVAVIAVLQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

70.5

36.3

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

72.3

0.5

0.9

66.5

35.7

Minor 5ss

37.4

-1.4

44.6

45.1

Minor BPS

49.8

0.07

2.3

75.27

47.4

Associated Gene:

Gene:

NUDT5

Ensembl Gene ID:

ENSAPLG00000005616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030638

5801482 - 5811701

10220

ENSAPLT00000027298

5800149 - 5809189

9041

ENSAPLT00000019545

5800149 - 5811701

11553

ENSAPLT00000005846

5800253 - 5809189

8937