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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5804195_5805343_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5804195 - 5805343

Intron Length:

1149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGCTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

AATGCATCAATT

Flanking Amino Acid:

TTYTDPNGKTRTWETVKRAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

75.1

33.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

62.7

0.29

1.1

57.8

42.1

Minor 5ss

-1.8

3.1

45.2

42.8

Minor BPS

49.6

0.05

1.9

69.35

41.4

Associated Gene:

Gene:

NUDT5

Ensembl Gene ID:

ENSAPLG00000005616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027298

5800149 - 5809189

9041

ENSAPLT00000019545

5800149 - 5811701

11553

ENSAPLT00000005846

5800253 - 5809189

8937

ENSAPLT00000030638

5801482 - 5811701

10220