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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5808837_5809076_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

5808837 - 5809076

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTCATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTACTCTGAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

80.2

0.68

0.8

75.8

32.8

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

52.8

-0

1.6

60.14

40.9

Associated Gene:

Gene:

NUDT5

Ensembl Gene ID:

ENSAPLG00000005616

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027298

5800149 - 5809189

9041

ENSAPLT00000005846

5800253 - 5809189

8937