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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58166814_58187800_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58166814 - 58187800

Intron Length:

20987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATCC

Flanking Amino Acid:

VFRDQQDAAERRRDFLQWML

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.7

37.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.2

0.66

0.9

73.3

36.9

Minor 5ss

31.6

-2.1

3.1

40.3

45.3

Minor BPS

56.4

0.18

1.8

69.92

41.8

Associated Gene:

Gene:

TBXAS1

Ensembl Gene ID:

ENSAPLG00000006656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023660

58099995 - 58329351

229357

ENSAPLT00000021215

58099987 - 58329351

229365

ENSAPLT00000006928

58099995 - 58338487

238493

ENSAPLT00000029195

58100462 - 58329351

228890