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Intron Name: Anas_platyrhynchos_platyrhynchos_1_5823372_5824054_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5823372 - 5824054

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

GAAAAGATAATT

Flanking Amino Acid:

FPKLNWSAPRDAYWIAMNSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.5

40.6

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

0.74

0.6

81.6

23.4

Minor 5ss

36.6

-1.5

41.4

44.7

Minor BPS

39.5

-0.7

2.2

54.11

40.6

Associated Gene:

Gene:

CDC123

Ensembl Gene ID:

ENSAPLG00000005383

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005599

5816765 - 5848343

31579