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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58326567_58328712_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

58326567 - 58328712

Intron Length:

2146

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

TCTCTCTTGGTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.9

29.3

Major BPS

0.62

65.3

41.5

Major PPT

85.7

0.8

0.9

80.6

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

43.6

-0.4

3.4

71.41

40.3

Associated Gene:

Gene:

TBXAS1

Ensembl Gene ID:

ENSAPLG00000006656

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021215

58099987 - 58329351

229365

ENSAPLT00000023660

58099995 - 58329351

229357