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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58452310_58453081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58452310 - 58453081

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAA

U12 Branch Point Sequence:

TTCTGGTCAACG

Flanking Amino Acid:

DSPYPLWRLKTPDDHEAETG

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

60.5

0.26

1.3

63.4

44.3

Major PPT

0.5

69.7

40.3

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

44.9

-0.5

2.6

59.08

48.4

Associated Gene:

Gene:

HIPK2

Ensembl Gene ID:

ENSAPLG00000006030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006299

58387443 - 58484314

96872