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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58480919_58481929_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58480919 - 58481929

Intron Length:

1011

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGGCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAAAT

U12 Branch Point Sequence:

TAAGCTACAAAT

Flanking Amino Acid:

VLVECDSLAPVTTSHHSSSY

Intron Amino Acid Position:

1002

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

75.6

35.3

Major BPS

69.5

0.48

73.5

28.6

Major PPT

72.6

0.51

67.9

37.6

Minor 5ss

39.9

-1.1

2.9

44.2

Minor BPS

-0.3

1.9

60.85

42.2

Associated Gene:

Gene:

HIPK2

Ensembl Gene ID:

ENSAPLG00000006030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006299

58387443 - 58484314

96872