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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58546799_58577177_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58546799 - 58577177

Intron Length:

30379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTTATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

CCCTCCTTATTT

Flanking Amino Acid:

MVFSDEIFVEQQNF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

80.9

33.2

Major BPS

78.8

0.72

67.9

40.1

Major PPT

74.3

0.55

0.8

73.1

30.6

Minor 5ss

34.1

-1.8

3.2

48.6

47.1

Minor BPS

61.4

0.44

1.7

70.91

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005795

58546786 - 58649849

103064