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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58581477_58587298_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58581477 - 58587298

Intron Length:

5822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAAGAT

U12 Branch Point Sequence:

TTTTCTTTTCTT

Flanking Amino Acid:

VQFRRSVELEVYKISPKYAF

Intron Amino Acid Position:

955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

52.3

0.06

1.3

49.1

44.8

Major PPT

88.3

0.86

0.7

84.9

29.9

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047730

58513977 - 58649849

135873

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000021784

58513977 - 58649743

135767

ENSAPLT00000005795

58546786 - 58649849

103064