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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58587477_58589038_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58587477 - 58589038

Intron Length:

1562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGCCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAC

U12 Branch Point Sequence:

TCTGTAGGAATA

Flanking Amino Acid:

MPDNRFQVQTVLQFVPRNVD

Intron Amino Acid Position:

1014

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

52.4

0.06

1.2

37.3

Major PPT

80.4

0.68

0.8

31.8

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

-0.7

2.2

52.18

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047730

58513977 - 58649849

135873

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000021784

58513977 - 58649743

135767

ENSAPLT00000005795

58546786 - 58649849

103064