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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58589170_58590550_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58589170 - 58590550

Intron Length:

1381

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

ATTTTGCTGACA

Flanking Amino Acid:

HQEFYNFTVQILNITLSRPG

Intron Amino Acid Position:

1058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

86.9

0.83

0.7

84.4

30.5

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

47.9

-0.1

2.3

68.86

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005795

58546786 - 58649849

103064

ENSAPLT00000047730

58513977 - 58649849

135873

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000021784

58513977 - 58649743

135767