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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58597032_58599733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58597032 - 58599733

Intron Length:

2702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCAATGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TTTTCTGCAATG

Flanking Amino Acid:

QLMKSSWVRTVLLGVVDQRI

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.9

33.4

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

68.8

0.42

0.9

63.6

37.2

Minor 5ss

34.9

-1.7

2.8

43.6

43.5

Minor BPS

50.5

-0.1

2.2

67.06

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021784

58513977 - 58649743

135767

ENSAPLT00000005795

58546786 - 58649849

103064

ENSAPLT00000047730

58513977 - 58649849

135873

ENSAPLT00000031652

58513977 - 58649849

135873