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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58607811_58609126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58607811 - 58609126

Intron Length:

1316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGCCCT

5'SS Class:

major

3'SS Sequence:

TTTAACTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTCCTTTTAACT

Flanking Amino Acid:

GYRIEGAVAQPVEKLKESSS

Intron Amino Acid Position:

1247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.1

0.29

1.4

57.2

47.5

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.65

0.9

72.6

37.2

Minor 5ss

41.5

-1

3.1

53.6

43.3

Minor BPS

74.5

0.85

1.2

84.55

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000021784

58513977 - 58649743

135767

ENSAPLT00000005795

58546786 - 58649849

103064

ENSAPLT00000047730

58513977 - 58649849

135873