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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58623882_58626684_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58623882 - 58626684

Intron Length:

2803

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTGTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATG

Flanking Amino Acid:

KPSKTVRHRGRVSPSDADST

Intron Amino Acid Position:

1376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

75.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.3

0.43

1.1

65.7

44.8

Minor 5ss

36.9

-1.5

2.7

45.6

42.5

Minor BPS

72.1

0.55

1.2

71.21

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047730

58513977 - 58649849

135873

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000021784

58513977 - 58649743

135767

ENSAPLT00000005795

58546786 - 58649849

103064