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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58626807_58633308_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58626807 - 58633308

Intron Length:

6502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGTAATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAT

U12 Branch Point Sequence:

GTTCTGGTAATT

Flanking Amino Acid:

EGKPRRGAKKGPPQTSSGNE

Intron Amino Acid Position:

1417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

74.5

32.2

Major BPS

69.2

0.48

1.3

69.7

44.2

Major PPT

70.3

0.46

66.8

Minor 5ss

34.6

-1.8

2.8

35.2

41.4

Minor BPS

44.9

-0.3

2.5

69.3

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000005795

58546786 - 58649849

103064