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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58639298_58643751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58639298 - 58643751

Intron Length:

4454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTTTT

5'SS Class:

major

3'SS Sequence:

TTCTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CTTTTTGTAATC

Flanking Amino Acid:

TPPAAPGLLPRQNFGPGFLQ

Intron Amino Acid Position:

1704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.2

78.8

38.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

86.6

0.82

0.7

80.5

31.5

Minor 5ss

51.1

0.04

2.9

75.5

40.6

Minor BPS

54.9

0.13

68.66

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005795

58546786 - 58649849

103064

ENSAPLT00000047730

58513977 - 58649849

135873

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000021784

58513977 - 58649743

135767