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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58643898_58645639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58643898 - 58645639

Intron Length:

1742

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACACTTC

5'SS Class:

major

3'SS Sequence:

ATTTGCTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

TTTGCTTTTAAG

Flanking Amino Acid:

ARPRPVGSTAGSQIQHLTQV

Intron Amino Acid Position:

1753

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

66.7

40.1

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

73.3

0.52

1.1

76.2

37.5

Minor 5ss

46.7

-0.3

3.2

67.5

43.9

Minor BPS

51.8

-0

1.9

64.21

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047730

58513977 - 58649849

135873

ENSAPLT00000031652

58513977 - 58649849

135873

ENSAPLT00000005795

58546786 - 58649849

103064