Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_58671915_58672753_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58671915 - 58672753

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAG

U12 Branch Point Sequence:

TGCCCCTGCATG

Flanking Amino Acid:

RRCESLERILRFLENEMEGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.3

74.1

38.3

Major BPS

54.4

0.11

1.4

63.4

35.6

Major PPT

89.7

0.89

0.6

84.8

22.9

Minor 5ss

-1.6

2.7

37.8

40.1

Minor BPS

45.6

-0.4

1.9

50.4

43.7

Associated Gene:

Gene:

ATP6V0A4

Ensembl Gene ID:

ENSAPLG00000004825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005045

58671152 - 58695541

24390