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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58675865_58679924_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58675865 - 58679924

Intron Length:

4060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCAG

5'SS Class:

major

3'SS Sequence:

TTCCTGAGGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGCTTCTCACTT

Flanking Amino Acid:

LKQKIKKICDGFRATVYPCP

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

60.5

45.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

56.4

0.14

1.1

50.8

42.7

Minor 5ss

29.7

-2.3

3.2

30.2

42.9

Minor BPS

49.6

0.05

1.8

68.05

43.4

Associated Gene:

Gene:

ATP6V0A4

Ensembl Gene ID:

ENSAPLG00000004825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005045

58671152 - 58695541

24390