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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58681264_58681681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58681264 - 58681681

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGGGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCACCCTGACT

Flanking Amino Acid:

RIKRALHQGMERSGSTIAPI

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

38.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

72.9

0.52

65.3

41.1

Minor 5ss

30.9

-2.2

3.3

38.6

Minor BPS

50.7

0.1

1.8

65.66

44.7

Associated Gene:

Gene:

ATP6V0A4

Ensembl Gene ID:

ENSAPLG00000004825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005045

58671152 - 58695541

24390