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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58681833_58682616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58681833 - 58682616

Intron Length:

784

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAG

U12 Branch Point Sequence:

TTGTTTAGGAGT

Flanking Amino Acid:

GVGNYREMNPAPYTIITFPF

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

57.4

0.18

1.6

57.4

49.1

Major PPT

89.3

0.88

0.6

22.7

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

43.3

-0.4

1.9

63.55

41.3

Associated Gene:

Gene:

ATP6V0A4

Ensembl Gene ID:

ENSAPLG00000004825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005045

58671152 - 58695541

24390