Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_58693139_58693658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58693139 - 58693658

Intron Length:

520

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

GCTCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

TAGCACTGACAT

Flanking Amino Acid:

SAFLHALRLHWVEFQNKFYV

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

68.8

42.2

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

70.9

0.47

0.8

61.5

34.9

Minor 5ss

33.2

-1.9

3.5

45.9

44.6

Minor BPS

42.8

-0.4

1.9

58.39

43.5

Associated Gene:

Gene:

ATP6V0A4

Ensembl Gene ID:

ENSAPLG00000004825

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005045

58671152 - 58695541

24390