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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58702481_58703897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58702481 - 58703897

Intron Length:

1417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

CCCTTTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTTAT

U12 Branch Point Sequence:

TCTGCCTTATTT

Flanking Amino Acid:

VGGGVSGHAQGLIIKTEFLP

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

57.9

46.7

Major BPS

61.1

0.28

1.3

53.6

43.8

Major PPT

71.3

0.48

0.8

34.6

Minor 5ss

30.6

-2.2

3.2

31.8

42.1

Minor BPS

64.7

0.54

1.7

79.24

43.6

Associated Gene:

Gene:

SVOPL

Ensembl Gene ID:

ENSAPLG00000004468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004593

58699825 - 58712308

12484