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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58703962_58705585_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

58703962 - 58705585

Intron Length:

1624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTGGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTGCTGTTAACC

Flanking Amino Acid:

YRGYMLPLSQVFWLAGSLLI

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

71.6

0.54

33.1

Major PPT

58.5

0.19

1.2

62.2

37.8

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

57.5

0.22

2.1

71.13

40.3

Associated Gene:

Gene:

SVOPL

Ensembl Gene ID:

ENSAPLG00000004468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004593

58699825 - 58712308

12484