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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58705712_58705982_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58705712 - 58705982

Intron Length:

271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTGCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAA

U12 Branch Point Sequence:

CTTTCTACAACT

Flanking Amino Acid:

PGIILILVFKFIPESARYNV

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

0.27

1.1

69.2

36.3

Major PPT

77.1

0.61

0.9

72.8

37.5

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

59.5

0.38

1.9

81.08

40.7

Associated Gene:

Gene:

SVOPL

Ensembl Gene ID:

ENSAPLG00000004468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004593

58699825 - 58712308

12484