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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58707237_58708997_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58707237 - 58708997

Intron Length:

1761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCATCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTCAT

U12 Branch Point Sequence:

TTCCCTGTCAAT

Flanking Amino Acid:

LRTTLQIWIIWLGIAFAYYG

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

82.5

30.8

Major BPS

72.4

0.56

1.2

39.9

Major PPT

75.4

0.57

0.8

69.1

31.5

Minor 5ss

46.3

-0.4

2.8

64.2

42.3

Minor BPS

43.3

-0.4

2.4

65.96

44.8

Associated Gene:

Gene:

SVOPL

Ensembl Gene ID:

ENSAPLG00000004468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004593

58699825 - 58712308

12484