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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58711785_58712161_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58711785 - 58712161

Intron Length:

377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATCT

Flanking Amino Acid:

GAMVAPFISQVLMSASFLGA

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

71.6

31.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.4

0.91

0.7

85.8

27.4

Minor 5ss

32.4

-2

3.3

39.8

Minor BPS

68.6

0.66

1.5

83.95

37.1

Associated Gene:

Gene:

SVOPL

Ensembl Gene ID:

ENSAPLG00000004468

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004593

58699825 - 58712308

12484