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Intron Name: Anas_platyrhynchos_platyrhynchos_1_58806072_58810975_R

Intron Information:

Intron Rank:

137829

Intron Class:

major

Intron Phase:

Intron Coordinates:

58806072 - 58810975

Intron Length:

4904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

CATGCTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

75.2

0.57

0.8

66.7

35.6

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

0.64

1.4

76.34

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021658

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024879

58802672 - 58814374

11703

ENSAPLT00000020462

58795072 - 58814374

19303

ENSAPLT00000033844

58795072 - 58814374

19303

ENSAPLT00000031065

58805562 - 58811964

6403