Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_58894614_58914838_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

58894614 - 58914838

Intron Length:

20225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCCCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CATACCTTTATT

Flanking Amino Acid:

GLGTYADPQKTPKGTCLESV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

69.1

41.8

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

75.4

0.57

0.8

75.6

28.2

Minor 5ss

36.2

-1.6

2.9

43.1

37.6

Minor BPS

60.4

0.41

1.7

73.67

43.4

Associated Gene:

Gene:

AKR1D1

Ensembl Gene ID:

ENSAPLG00000002867

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036162

58894521 - 58933335

38815

ENSAPLT00000002944

58894521 - 58933335

38815