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Intron Name: Anas_platyrhynchos_platyrhynchos_1_59033406_59036390_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

59033406 - 59036390

Intron Length:

2985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCTTC

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCTCCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTATATATAT

Flanking Amino Acid:

GIQMPRNH*TCSLKV*NQNS

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

67.3

39.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

0.72

0.6

81.6

23.3

Minor 5ss

52.2

0.08

2.7

73.6

36.7

Minor BPS

47.6

-0.1

2.1

75.32

Associated Gene:

Gene:

KDM7A

Ensembl Gene ID:

ENSAPLG00000016389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031841

59025945 - 59052701

26757

ENSAPLT00000017105

59025945 - 59057736

31792