Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_59036549_59037037_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

59036549 - 59037037

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAGT

5'SS Class:

major

3'SS Sequence:

TCTTGTGAGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAA

U12 Branch Point Sequence:

TTTGTAAGAATA

Flanking Amino Acid:

AFCCQMEE**EMRDAHLQIE

Intron Amino Acid Position:

495

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

41.8

Major BPS

62.3

0.31

1.4

63.7

43.9

Major PPT

64.8

0.33

1.1

60.9

Minor 5ss

33.5

-1.9

3.3

49.6

46.3

Minor BPS

44.7

-0.4

1.9

61.94

38.2

Associated Gene:

Gene:

KDM7A

Ensembl Gene ID:

ENSAPLG00000016389

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017105

59025945 - 59057736

31792

ENSAPLT00000031841

59025945 - 59052701

26757